Computational Phylogenomics Lab @ ANU

Enable evolutionary research in the genomic era

Our mission

We combine efficient bioinformatic methods and advanced models of molecular evolution for phylogenetic inference from ultra-large genomic data.
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IQ-TREE is our flagship software that implements new models and methods developed other the years.

Selected publications

  1. Maximum likelihood pandemic-scale phylogenetics
    N. De Maio, P. Kalaghatgi, Y. Turakhia, R. Corbett-Detig, B.Q. Minh, N. Goldman
    Nature Genetics (2023)

  2. AliSim: A fast and versatile phylogenetic sequence simulator for the genomic era
    N. Ly-Trong, S. Naser-Khdour, R. Lanfear, B.Q. Minh
    Molecular Biology and Evolution msac092 (2022)

  3. nQMaker: Estimating Time Nonreversible Amino Acid Substitution Models
    C.C. Dang, B.Q. Minh, H. McShea, J. Masel, J.E. James, L.S. Vinh, R. Lanfear
    Systematic Biology 71:1110-1123 (2022)

  4. Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression
    D. Vanderpool, B.Q. Minh, R. Lanfear, D. Hughes, S. Murali, R.A. Harris, M. Raveendran, D.M. Muzny, M.S. Hibbins, R.J. Williamson, R.A. Gibbs, K.C. Worley, J. Rogers, M.W. Hahn
    PLOS Biology 18:e3000954 (2020)

  5. IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era
    B.Q. Minh, H.A. Schmidt, O. Chernomor, D. Schrempf, M.D. Woodhams, A. von Haeseler, R. Lanfear
    Molecular Biology and Evolution 37:1530-1534 (2020)

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© 2019-2023 Minh Bui Lab on Computational Phylogenomics @ School of Computing Australian National University